To isolate cDNA coding for
matrix meta110proteinases (MMPs) from fish, we first investigated Ca2+-dependent
gelatinolytic activities in conditioned media of eight fish cell lines using gelatin-zymography
with and without Ca2+. As a result, we found the major activity at positions
of 60, 66, 70 and 80 kDa, respectively in some cell lines. RT-PCR was performed
using total RNA from ASE cells, which were derived from Atlantic salmon and
expressed the gelatinolytic enzyme of 66 kDa, and using degenerate primers that
were designed on the basis of the conserved amino acid sequences corresponding
to cysteine switch and catalytic domain MMP. Amplified DNA was 329 bp 10ng and
its deduced amino acid sequence was highly homologous to known MMPs. Based on
this nucleotide sequence, we performed 5'and 3'RACE and finally obtained 1714
bp long cDNA coding for a protein of 462 amino acid residues The amino acid
sequence showed higher homologies (54-56%identities) to MMP13s (collagenase 3) from
several species than Other MMPs, suggesting that the cloned cDNA coded for a
salmon counterpart ofMMP13.